Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title Type [ Year(Desc)]
2018
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility]. Wellcome Open Res. 3:44.
Kumar VPradeep, Kolte AP, Dhali A, Naik C, Sridhar M.  2018.  Enhanced delignification of lignocellulosic substrates by Pichia GS115 expressed recombinant laccase. [Mass Spectrometry - Proteomics]. J Gen Appl Microbiol.
Shadrick WR, Slavish PJ, Chai SC, Waddell B, Connelly M, Low JA, Tallant C, Young BM, Bharatham N, Knapp S et al..  2018.  Exploiting a water network to achieve enthalpy-driven, bromodomain-selective BET inhibitors. Bioorganic & Medicinal Chemistry. 26:25-36.
Kalita B, Patra A, Jahan S, Mukherjee AK.  2018.  First report of the characterization of a snake venom apyrase (Ruviapyrase) from Indian Russell's viper (Daboia russelii) venom. [Mass Spectromety Facility - Proteomics]. Int J Biol Macromol. 111:639-648.
Solari KA, Ramakrishnan U, Hadly EA.  2018.  Gene expression is implicated in the ability of pikas to occupy Himalayan elevational gradient. [Next Gen Genomics Facility]. PLoS One. 13(12):e0207936.
Surendran H, Rathod RJ, Pal R.  2018.  Generation of Transplantable Retinal Pigmented Epithelial (RPE) Cells for Treatment of Age-Related Macular Degeneration (AMD). [Eyestem, a C-CAMP Startup]. Methods Mol Biol.
Nadiya F, Anjali N, Thomas J, , Sabu KK.  2018.  Genome-wide differential expression profiling in wild and cultivar genotypes of cardamom reveals regulation of key pathways in plant growth and development [Next Gen Genomics Facility]. Agri Gene. 8:18-27.
Siddiqui A, Badruddeen., Akhtar J, MS SUddin, S C, Khan MIrfan, Khalid M.  2018.  Highly Sensitive LC-MS/MS-ESI method Development for the Determination of 5,7-dihydroxyflavone in Mouse Plasma and Pharmacokinetic Study in Lean and Diet Induced Obese Mice [High Throughput Screening Facility].. Der Pharmacia Lettre. 10(11)
Sharmila GRamachandr, Halami PMotiram, Venkateswaran G.  2018.  Identification and characterization of a calcium dependent bacillopeptidase from Bacillus subtilis CFR5 with novel kunitz trypsin inhibitor degradation activity. [Mass Spectrometry Facility - Proteomics]. Food Res Int. 103:263-272.
Anjali N., Nadiya F., Thomas J, Sabu K.K.  2018.  Identification and characterization of drought responsive microRNAs and their target genes in cardamom (Elettaria cardamomum Maton) [Next Gen Genomics Facility]. Plant Growth Regulation.
Subramanian SPeruvemba, Babu P, Palakodeti D, Subramanian R.  2018.  Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose -glycans in the planarian. [Mass Spectrometry Facility - Glycomics]. J Biol Chem. 293(18):6707-6720.
Lomate PR, Dewangan V, Mahajan N, Kumar Y, Kulkarni A, Wang L, Saxsena S, Gupta VS, Giri AP.  2018.  Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in [Next Gen Genomics Facility]. Mol Cell Proteomics.
Ganaie MY, Qureshi S, Kashoo Z, Wani SA, Hussain MI, Kumar R, Maqbool R, Sikander P, Banday MS, Malla WA et al..  2018.  Isolation and characterization of two lytic bacteriophages against Staphylococcus aureus from India: newer therapeutic agents against Bovine mastitis. [Electron Microscopy Facility]. Vet Res Commun.
Ramesh D, Brockmann A.  2018.  Mass Spectrometric Quantification of Arousal Associated Neurochemical Changes in Single Honey Bee Brains and Brain Regions. [Mass Spectrometry Facility - Metabolomics]. ACS Chem Neurosci.
Thottacherry JJose, Kosmalska AJoanna, Kumar A, Vishen ASingh, Elosegui-Artola A, Pradhan S, Sharma S, Singh PP, Guadamillas MC, Chaudhary N et al..  2018.  Mechanochemical feedback control of dynamin independent endocytosis modulates membrane tension in adherent cells. [Microfluidics and Microfabrication Facility]. Nat Commun. 9(1):4217.
Walvekar AS, Srinivasan R, Gupta R, Laxman S.  2018.  Methionine coordinates a hierarchically organized anabolic program enabling proliferation. [Mass Spectrometry - Lipidomics & Metabolomics and Next Gen Sequencing Facilities]. Mol Biol Cell. :mbcE18080515.
Siddiqui A, Badruddeen., Akhtar J, M.S. SUddin, Khan MIrfan, Khalid M, Ahmad M.  2018.  A Naturally Occurring Flavone (Chrysin): Chemistry, Occurrence, Pharmacokinetic, Toxicity, Molecular Targets and Medicinal Properties [High Throughput Screening Facility].. Journal of Biologically Active Products from Nature. 8:208-227.
P SHameed, Bharatham N, Katagihallimath N, Sharma S, Nandishaiah R, Shanbhag AP, Thomas T, Narjari R, Sarma M, Bhowmik P et al..  2018.  Nitrothiophene carboxamides, a novel narrow spectrum antibacterial series: Mechanism of action and Efficacy.. Sci Rep. 8(1):7263.
Gautam V, Shafiq N, Mouton JW, Malhotra S, Kaur S, Ray P.  2018.  Pharmacokinetics of colistin in patients with multidrug-resistant Gram-negative infections: A pilot study [Mass Spectrometry - Metabolomics Facility].. Indian J Med Res. 147(4):407-412.
Thorat K, Pandey S, Chandrashekharappa S, Vavilthota N, Hiwale AA, Shah P, Sreekumar S, Upadhyay S, Phuntsok T, Mahato M et al..  2018.  Prevention of pesticide-induced neuronal dysfunction and mortality with nucleophilic poly-Oxime topical gel. [BIG Grant Supported Entrepreneur]. Sci Adv. 4(10):eaau1780.
Nallagangula KSumanth, Lakshmaiah V, Muninarayana C, Deepa KV, Shashidhar KN.  2018.  A proteomic approach of biomarker candidate discovery for alcoholic liver cirrhosis [Mass Spectrometry - Proteomics Facility].. J Circ Biomark. 7:1849454418788417.
Rangiah K, Palakodeti D.  2018.  Quantification of Neurotransmitters from Intact and Regenerating Planarians Using UHPLC-MS/SRM Method. [Mass Spectrometry - Metabolomics Facility]. Methods Mol Biol. 1774:555-570.
Yang G, Humphrey SJ, Murashige DS, Francis D, Wang Q-P, Cooke KC, Neely G, James DE.  2018.  RagC phosphorylation autoregulates mTOR complex 1. [Drosophila Facility]. EMBO J.
Dash PKumar, Pattabiraman C, Tandel K, Sharma S, Kumar JS, Siddappa S, Gowda M, Krishna S, Parida M.  2018.  Recovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing. [Next Gen Genomics Facility]. Genome Announc. 6(26)
Lal A, Krishna S, Seshasayee ASai Narain.  2018.  Regulation of Global Transcription in by Rsd and 6S RNA. [Next Gen Genomics Facility]. G3 (Bethesda).

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