Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Journal Article
Upadhyay AK, Chacko AR, Gandhimathi A, Ghosh P, Harini K, Joseph AP, Joshi AG, Karpe SD, Kaushik S, Kuravadi N et al..  2015.  Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties.[Mass spectrometry - Metabolomics]. BMC Plant Biol. 15:212.
Prabhakara S, Khedkar S, Shambat SMairpady, Srinivasan R, Basu A, Norrby-Teglund A, Seshasayee ASai Narain, Arakere G.  2013.  Genome sequencing unveils a novel sea enterotoxin-carrying PVL phage in Staphylococcus aureus ST772 from India. [Next Generation Genomics facility]. PLoS One. 8(3):e60013.
Goyal R, Jerath G, Akhil R, Chandrasekharan A, Puppala ERao, Ponneganti S, Sarma A, Naidu VGM, Santhoshkumar TR, Ramakrishnan V.  2021.  Geometry encoded functional programming of tumor homing peptides for targeted drug delivery [Image Analysis Support]. J Control Release.
Goyal R, Jerath G, Akhil R, Chandrasekharan A, Puppala ERao, Ponneganti S, Sarma A, Naidu VGM, Santhoshkumar TR, Ramakrishnan V.  2021.  Geometry encoded functional programming of tumor homing peptides for targeted drug delivery [Image Analysis Support]. J Control Release.
Subramanian SPeruvemba, Lakshmanan V, Palakodeti D, Subramanian R.  2021.  Glycomic and glycotranscriptomic profiling of mucin-type O-glycans in planarian Schmidtea mediterranea [Mass Spectrometry - Glycomics]. Glycobiology.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Naik T, Sharda M, P LC, Virbhadra K, Pandit A.  2023.  High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in [Next Gen Genomics Facility (INT)]. BMC Genomics. 24(1):141.
Naik T, Sharda M, P LC, Virbhadra K, Pandit A.  2023.  High-quality single amplicon sequencing method for illumina MiSeq platform using pool of 'N' (0-10) spacer-linked target specific primers without PhiX spike-in [Next Gen Genomics Facility (INT)]. BMC Genomics. 24(1):141.
Surendran H, Nandakumar S, Pal R.  2020.  Human induced pluripotent stem cell-derived lung epithelial system for SARS-CoV-2 infection modeling and its potential in drug repurposing [Eyestem Research Pvt. Ltd., a C-CAMP Startup]. Stem Cells Dev.
Subramanian SPeruvemba, Babu P, Palakodeti D, Subramanian R.  2018.  Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose -glycans in the planarian. [Mass Spectrometry Facility - Glycomics (INT)]. J Biol Chem. 293(18):6707-6720.
Sankaradoss A, Jagtap S, Nazir J, Moula SE, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences [C-CAMP Bioincubation Facility]. Molecular Therapy - Cell Press.
Sankaradoss A, Jagtap S, Nazir J, Moula SE, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences [C-CAMP Bioincubation Facility]. Molecular Therapy - Cell Press.
Srivastava M, Nambiar M, Sharma S, Karki SS, Goldsmith G, Hegde M, Kumar S, Pandey M, Singh RK, Ray P et al..  2012.  An inhibitor of nonhomologous end-joining abrogates double-strand break repair and impedes cancer progression.. Cell. 151(7):1474-87.
Agrawal N, Venkiteswaran G, Sadaf S, Padmanabhan N, Banerjee S, Hasan G.  2010.  Inositol 1,4,5-trisphosphate receptor and dSTIM function in Drosophila insulin-producing neurons regulates systemic intracellular calcium homeostasis and flight. [Drosophila facility]. J Neurosci. 30(4):1301-13.
Ashwini S., Bobby Z, Joseph M, Jacob SElizabeth, Padmapriya R.  2015.  Insulin plant (Costus pictus) extract improves insulin sensitivity and ameliorates atherogenic dyslipidaemia in fructose induced insulin resistant rats: Molecular mechanism [Mass spectrometry - Metabolomics]. Journal of Functional Foods. 17:749-760.
Nandakumar S, Shahani P, Datta I, Pal R.  2021.  Interventional Strategies for Parkinson Disease: Can Neural Precursor Cells Forge a Path Ahead? [Eyestem Research, a C-CAMP startup] ACS Chemical Neuroscience.
Baranyai T, Herczeg K, Onódi Z, Voszka I, Módos K, Marton N, Nagy G, Mäger I, Wood MJ, Andaloussi SEl et al..  2015.  Isolation of Exosomes from Blood Plasma: Qualitative and Quantitative Comparison of Ultracentrifugation and Size Exclusion Chromatography Methods. (Mass spectrometry - Proteomics). PLoS One. 10(12):e0145686.
Joshi AG, Harini K., Meenakshi I, K. Shafi M, Pasha SNaseer, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways [Next Gen Genomics Facility (INT)]. MethodsX. :101053.
Joshi AG, Harini K., Meenakshi I, K. Shafi M, Pasha SNaseer, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  A knowledge-driven protocol for prediction of proteins of interest with an emphasis on biosynthetic pathways [Next Gen Genomics Facility (INT)]. MethodsX. :101053.
Saha R, Verma PKumar, Rakshit S, Saha S, Mayor S, Pal SKumar.  2013.  Light driven ultrafast electron transfer in oxidative redding of Green Fluorescent Proteins. [Protein Technology Facility]. Sci Rep. 3:1580.
G. Pandian S.  2021.  Live cells extracts of freshly cut Chicken and of Baby Sprouts of Mung Beans with UV Absorption and Proton NMR spectra [NMR Facility]. Current Nutrition & Food Science.
Tanuku SNaga Radha, Pinnaka AKumar, Behera S, Singh A, Pydi S, Vasudeva G, Vaidya B, Sharma G, Ganta SKumar, Garbhapu NSagar.  2023.  Marinobacterium lacunae sp. nov. isolated from estuarine sediment [Next Gen Genomics Facility]. Arch Microbiol. 205(8):294.

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