Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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[ Author(Desc)] Title Type Year
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Sharmila GRamachandr, Halami PMotiram, Venkateswaran G.  2018.  Identification and characterization of a calcium dependent bacillopeptidase from Bacillus subtilis CFR5 with novel kunitz trypsin inhibitor degradation activity. [Mass Spectrometry Facility - Proteomics]. Food Res Int. 103:263-272.
Shaw AG, Troman C, Akello JOdeke, O'Reilly KM, Gauld J, Grow S, Grassly N, Steele D, Blazes D, Kumar S.  2023.  Defining a research agenda for environmental wastewater surveillance of pathogens.. Nat Med.
Shrivastava R, Köster D, Kalme S, Mayor S, Neerathilingam M.  2015.  Tailor-made ezrin actin binding domain to probe its interaction with actin in-vitro. [Protein Technology Core]. PLoS One. 10(4):e0123428.
Shukla PSheel, Nivetha N, Nori SSailaja, Bose D, Kumar S, Khandelwal S, Critchley A, Suryanarayan S.  2023.  Understanding the mode of action of AgroGain®, a biostimulant derived from the red seaweed Kappaphycus alvarezii in the stimulation of cotyledon expansion and growth of Cucumis sativa (cucumber) [Sea6Energy Pvt. Ltd, a C-CAMP Start-up]. Front. Plant Sci.. 14
Siddiqui AM, Akhtar J, S SUddin M, Khan MIrfan, Khalid M.  2019.  Molecular mechanism of interactions between Chrysin and I-kappa-B kinase epsilon (IKKe)/Tank Binding Kinase-1(TBK1): Cell based assay and insilico molecular docking studies [High Throughput Screening Facility].. J Biomol Struct Dyn. :1-9.
Siddiqui A, Badruddeen., Akhtar J, MS SUddin, S C, Khan MIrfan, Khalid M.  2018.  Highly Sensitive LC-MS/MS-ESI method Development for the Determination of 5,7-dihydroxyflavone in Mouse Plasma and Pharmacokinetic Study in Lean and Diet Induced Obese Mice [High Throughput Screening Facility].. Der Pharmacia Lettre. 10(11)
Siddiqui MAmir, Akhtar J, Uddin S, Chandrashekharan SMadappa, Ahmad M, Khan MIrfan, Khalid M.  2021.  Chrysin modulates protein kinase IKK$\varepsilon$/TBK1, insulin sensitivity and hepatic fatty infiltration in diet-induced obese mice [Mass Spectrometry - Lipidomics]. Drug Development Research.
Siddiqui A, Badruddeen., Akhtar J, M.S. SUddin, Khan MIrfan, Khalid M, Ahmad M.  2018.  A Naturally Occurring Flavone (Chrysin): Chemistry, Occurrence, Pharmacokinetic, Toxicity, Molecular Targets and Medicinal Properties [High Throughput Screening Facility].. Journal of Biologically Active Products from Nature. 8:208-227.
Sikiru ABabatunde, Arangasamy A, Egena SSunday Ach, Veerasamy S, Reddy IJanardhan, Raghavendra B.  2021.  Elucidation of the liver proteome in response to an antioxidant intake in rabbits [Mass Spectrometry - Proteomics Facility]. Egyptian Liver Journal . 11
Singh NKumar, Kumar S, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Acinetobacter baumannii Strain MSP4-16. (Next Generation Genomics). Genome Announc. 1(2):e0013713.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway [Discovery to Innovation Accelerator]. Nat Commun. 10(1):89.
Singh J, Sabareesan AT, Mathew MK, Udgaonkar JB.  2012.  Development of the structural core and of conformational heterogeneity during the conversion of oligomers of the mouse prion protein to worm-like amyloid fibrils.. J Mol Biol. 423(2):217-31.
Singhal AV, Malwal D, Thiyagarajan S, Lahiri I.  2021.  Antimicrobial and antibiofilm activity of GNP-Tannic Acid-Ag nanocomposite and their epoxy-based coatings [Log9 Materials, a C-CAMP startup]. Progress in Organic Coatings. 159:106421.
Sn S, Pandurangi J, Murumalla R, Dj V, Garimella L, Acharya A, Rai S, Paul A, Yarreiphang H, Pillai MS et al..  2019.  Small molecule modulator of aggrephagy regulates neuroinflammation to curb pathogenesis of neurodegeneration [Discovery to Innovation Accelerator (INT)].. EBioMedicine.
Solari KA, Ramakrishnan U, Hadly EA.  2018.  Gene expression is implicated in the ability of pikas to occupy Himalayan elevational gradient. [Next Gen Genomics Facility (INT)]. PLoS One. 13(12):e0207936.
Somani D, Adhav R, Prashant R, Kadoo NY.  2019.  Transcriptomics analysis of propiconazole-treated Cochliobolus sativus reveals new putative azole targets in the plant pathogen [Next Gen Genomics Facility].. Funct Integr Genomics.
Sridhar A, Manikandan DBabu, Marimuthu SKumar, Murugesan M, Ramasamy T.  2021.  Methanol Skin Mucus Extract of Mrigal (Cirrhinus mrigala) Fish Peptide Targeting Viral Particles of Infectious Pancreatic Necrosis Virus (IPNV) and Infectious Salmon Anemia Virus (ISAV): an in silico Approach [Mass Spectrometry Facility]. International Journal of Peptide Research and Therapeutics. 71
Srikanth J, Agalyadevi R, Babu P.  2017.  Targeted, Site-specific quantitation of N- and O-glycopeptides using (18)O-labeling and product ion based mass spectrometry.. Glycoconj J. 34(1):95-105.
Srinivas TNR, Aditya S, Bhumika V, P Kumar A.  2014.  Lunatimonas lonarensis gen. nov., sp. nov., a haloalkaline bacterium of the family Cyclobacteriaceae with nitrate reducing activity [Next Gen Genomics Facility]. Syst Appl Microbiol. 37(1):10-6.
Srinivasan R, Chandraprakash D, Krishnamurthi R, Singh P, Scolari VF, Krishna S, Seshasayee ASai Narain.  2013.  Genomic analysis reveals epistatic silencing of "expensive" genes in Escherichia coli K-12. [Next Generation Genomics facility]. Mol Biosyst. 9(8):2021-33.
Srinivasu BY, Arumugaperumal A, Mitra A, Muralidharan M, Das R, Mandal AKumar.  2021.  Effect of nanoparticle exposure in a living system: probed by quantification of Fetuin-B in plasma proteome and kidney tissue imaging using MALDI imaging mass spectrometry in a rat model [Mass Spectrometry - Proteomics Facility]. Journal of Nanoparticle Research . 23
Srivastava M, Nambiar M, Sharma S, Karki SS, Goldsmith G, Hegde M, Kumar S, Pandey M, Singh RK, Ray P et al..  2012.  An inhibitor of nonhomologous end-joining abrogates double-strand break repair and impedes cancer progression.. Cell. 151(7):1474-87.
Srivastava AKumar, Pandey M, Ghate T, Kumar V, Upadhyay MKumar, Majumdar A, Sanjukta AKumar, Agrawal AKumar, Bose S, Srivastava S et al..  2021.  Chemical intervention for enhancing growth and reducing grain arsenic accumulation in rice [Mass Spectrometry - Metabolomics Facility]. Environ Pollut. 276:116719.
Srivathsa A, Rodrigues RG, Ben Toh K, Zachariah A, Taylor RW, Oli MK, Ramakrishnan U.  2021.  The truth about scats and dogs: Next-generation sequencing and spatial capture–recapture models offer opportunities for conservation monitoring of an endangered social canid [Next Gen Genomics Facility (INT)].. Biological Conservation. 256:109028.
Stelfox M, Burian A, Shanker K, Rees AF, Jean C, Willson MS, Manik NAhmed, Sweet M.  2020.  Tracing the origin of olive ridley turtles entangled in ghost nets in the Maldives: A phylogeographic assessment of populations at risk [Next Gen Genomics Facility]. Biological Conservation. 245:108499.

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