Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Journal Article
Latha MBiligowda, Shetty AKishan, Deveswaran R, Rai AJagannath, Joy S, Shashanka HMunegowda, Hussain SSha Muhamm, Shetty S.  2023.  Analysis of smart biomaterial containing umbilical cord blood serum protein conjugated with P-(NIPAAM) using spectroscopy [Bio-incubation Services]. Materials Today: Proceedings.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility (INT)]. Wellcome Open Res. 3:44.
Datta S.  2023.  The conundrum of bacteria-specific antibiotics [Bugworks Research Pvt. Ltd., a C-CAMP Startup]. J Antimicrob Chemother. 78(6):1354-1358.
Nayak SRanjan, Joseph D, Höfner G, Dakua A, Athreya A, Wanner KT, Kanner BI, Penmatsa A.  2023.  Cryo-EM structure of GABA transporter 1 reveals substrate recognition and transport mechanism [National Cryo-Electron Microscopy Facility]. Nat Struct Mol Biol.
Shanbhag AP, Rajagopal S, Ghatak A, Katagihallimath N, Subramanian R, Datta S.  2023.  A curated list of targeted optimized promiscuous ketoreductases (TOP-K). [Bugworks Research Pvt. Ltd., a C-CAMP Startup]. Biochem J. 480(13):975-997.
Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y.  2013.  Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata. [Next Generation Genomics facility]. Nucleic Acids Res. 41(1):599-616.
Ghatak A, Bharatham N, Shanbhag AP, Datta S, Venkatraman J.  2017.  Delineating Substrate Diversity of Disparate Short-Chain Dehydrogenase Reductase from Debaryomyces hansenii [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. PLoS One. 12(1):e0170202.
Ghosh S, Kundu R, Chandana M, Das R, Anand A, Beura S, Bobde RChandrakan, Jain V, Prabhu SRamakant, Behera PKumari et al..  2023.  Distinct evolution of type I glutamine synthetase in Plasmodium and its species-specific requirement [Mass Spectrometry Facility - Metabolomics]. Nat Commun. 14(1):4216.
Ghosh S, Kundu R, Chandana M, Das R, Anand A, Beura S, Bobde RChandrakan, Jain V, Prabhu SRamakant, Behera PKumari et al..  2023.  Distinct evolution of type I glutamine synthetase in Plasmodium and its species-specific requirement [Mass Spectrometry Facility - Metabolomics]. Nat Commun. 14(1):4216.
Masurkar SArun, Deogharkar A, Bharambe HShrikrishn, Shirsat NVishwanath.  2021.  Downregulation of CRX, a Group 3-specific oncogenic transcription factor, inhibits TGF-β activin signaling in medulloblastoma cells [Genomics Facility]. Biochemical and Biophysical Research Communications. 568:76–82.
Rai A, Pathak D, Thakur S, Singh S, Dubey AKumar, Mallik R.  2016.  Dynein Clusters into Lipid Microdomains on Phagosomes to Drive Rapid Transport toward Lysosomes.. Cell. 164(4):722-34.
Bhutani S, Das A, Maheshwari M, Lakhotia SC, Jana NR.  2012.  Dysregulation of core components of SCF complex in poly-glutamine disorders. [Drosophila facility]. Cell Death Dis. 3:e428.
Chakraborty M, Paul BK, Nayak T, Das A, Jana NR, Bhutani S.  2015.  The E3 ligase ube3a is required for learning in Drosophila melanogaster. [Drosophila facility]. Biochem Biophys Res Commun. 462(1):71-7.
Srinivasu BY, Arumugaperumal A, Mitra A, Muralidharan M, Das R, Mandal AKumar.  2021.  Effect of nanoparticle exposure in a living system: probed by quantification of Fetuin-B in plasma proteome and kidney tissue imaging using MALDI imaging mass spectrometry in a rat model [Mass Spectrometry - Proteomics Facility]. Journal of Nanoparticle Research . 23
Kumar VPradeep, Kolte AP, Dhali A, Naik C, Sridhar M.  2018.  Enhanced delignification of lignocellulosic substrates by Pichia GS115 expressed recombinant laccase. [Mass Spectrometry - Proteomics]. J Gen Appl Microbiol.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway [Discovery to Innovation Accelerator]. Nat Commun. 10(1):89.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway [Discovery to Innovation Accelerator]. Nat Commun. 10(1):89.
Dahal N, Romine MG, Khatiwara S, Ramakrishnan U, Lamichhaney S.  2023.  Gene flow drives genomic diversity in Asian Pikas distributed along the core and range‐edge habitats in the Himalayas [Next Gen Genomics Facility (INT)]. Ecol Evol.. 13(5)
Bose R, Adiga SK, D'Souza F, Salian SR, Uppangala S, Kalthur G, Jain N, Radhakrishnan RA, Bhat N, Krishnamurthy H et al..  2012.  Germ cell abnormalities in streptozotocin induced diabetic mice do not correlate with blood glucose level.. J Assist Reprod Genet. 29(12):1405-13.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Bhowmik P, Bharatham N, Murakami S, Ramachandran V, Datta S.  2023.  Identification of key amino acid residues in OqxB mediated efflux of fluoroquinolones using site-directed mutagenesis [Bugworks Research Pvt. Ltd., a C-CAMP Startup]. Res Microbiol. :104039.
Sankaradoss A, Jagtap S, Nazir J, Moula SE, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences [C-CAMP Bioincubation Facility]. Molecular Therapy - Cell Press.
Sankaradoss A, Jagtap S, Nazir J, Moula SE, Modak A, Fialho J, Iyer M, Shastri JS, Dias M, Gadepalli R et al..  2022.  Immune profile and responses of a novel dengue DNA vaccine encoding an EDIII-NS1 consensus design based on Indo-African sequences [C-CAMP Bioincubation Facility]. Molecular Therapy - Cell Press.

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