Recovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing. [Next Gen Genomics Facility]

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TitleRecovery of Five Complete Influenza A(H1N1)pdm09 Genome Sequences from the 2015 Influenza Outbreak in India by Metagenomic Sequencing. [Next Gen Genomics Facility]
Publication TypeJournal Article
Year of Publication2018
AuthorsDash PKumar, Pattabiraman C, Tandel K, Sharma S, Kumar JS, Siddappa S, Gowda M, Krishna S, Parida M
JournalGenome Announc
Volume6
Issue26
Date Published2018 Jun 28
ISSN2169-8287
Abstract

Five complete (H1N1)pdm09 viral sequences were recovered from hospitalized individuals during the 2015 influenza outbreak by metagenomic sequencing. Four of the genomes are from oropharyngeal swabs, and one is from an isolate. All five sequences belong to an emerging 6B clade. Studying them further is critical for outbreak preparedness.

DOI10.1128/genomeA.00511-18
Alternate JournalGenome Announc
PubMed ID29954887