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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title Type [ Year(Asc)]
2017
Bharatham N, Finch KE, Min J, Mayasundari A, Dyer MA, R Guy K, Bashford D.  2017.  Performance of a docking/molecular dynamics protocol for virtual screening of nutlin-class inhibitors of Mdmx.. J Mol Graph Model. 74:54-60.
Patra A, Kalita B, Chanda A, Mukherjee AK.  2017.  Proteomics and antivenomics of Echis carinatus carinatus venom: Correlation with pharmacological properties and pathophysiology of envenomation.. Sci Rep. 7(1):17119.
Vikram A, Lewarchik CM, Yoon J-Y, Naqvi A, Kumar S, Morgan GM, Jacobs JS, Li Q, Kim Y-R, Kassan M et al..  2017.  Sirtuin 1 regulates cardiac electrical activity by deacetylating the cardiac sodium channel.. Nat Med.
Kumar S, Kim Y-R, Vikram A, Naqvi A, Li Q, Kassan M, Kumar V*, Bachschmid MM, Jacobs JS, Kumar A et al..  2017.  Sirtuin1-regulated lysine acetylation of p66Shc governs diabetes-induced vascular oxidative stress and endothelial dysfunction.. Proc Natl Acad Sci U S A.
Srikanth J, Agalyadevi R, Babu P.  2017.  Targeted, Site-specific quantitation of N- and O-glycopeptides using (18)O-labeling and product ion based mass spectrometry.. Glycoconj J. 34(1):95-105.
Deshpande AB, Anamika K, Jha V, Chidley HG, Oak PS, Kadoo NY, Pujari KH, Giri AP, Gupta VS.  2017.  Transcriptional transitions in Alphonso mango (Mangifera indica L.) during fruit development and ripening explain its distinct aroma and shelf life characteristics [Next Gen Genomics Facility]. Sci Rep. 7(1):8711.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2017.  Transcriptome profiling of Elettaria cardamomum (L.) Maton (small cardamom).. Genom Data. 11:102-103.
Sathyanarayana N, Pittala RKumar, Tripathi PKumar, Chopra R, Singh HRussiachan, Belamkar V, Bhardwaj PKumar, Doyle JJ, Egan AN.  2017.  Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers [Next Gen Genomics Facility]. BMC Genomics. 18(1):409.
2016
Ambardar S, Singh HRussiachan, Gowda M, Vakhlu J.  2016.  Comparative Metagenomics Reveal Phylum Level Temporal and Spatial Changes in Mycobiome of Belowground Parts of Crocus sativus [Next Gen Genomics Facility]. PLoS One. 11(9):e0163300.
Neerathilingam M, Bairy SG, Mysore S.  2016.  Deciphering Mode of Action of Functionally Important Regions in the Intrinsically Disordered Paxillin (Residues 1-313) Using Its Interaction with FAT (Focal Adhesion Targeting Domain of Focal Adhesion Kinase). [Protein Technology Core]. PLoS One. 11(2):e0150153.
Rai A, Pathak D, Thakur S, Singh S, Dubey AKumar, Mallik R.  2016.  Dynein Clusters into Lipid Microdomains on Phagosomes to Drive Rapid Transport toward Lysosomes.. Cell. 164(4):722-34.
Kumar N, Gupta DGopal, Kumar S, al. et..  2016.  Exploring Packaged Microvesicle Proteome Composition of Chinese Hamster Ovary Secretome [Mass Spectrometry - Proteomics]. Journal of Bioprocessing & Biotechniques. 6:1-11.
Bhatt HH, Pasricha R, Upasani VN.  2016.  Isolation and Characterization of a Halophilic Cyanobacterium Euhalothece SLVH01 from Sambhar Salt Lake, India. Int.J.Curr.Microbiol.App.Sci (2016) 5(2): 215-224 [Electron Microscopy Facility - TEM].
Thakur R, Kini S, Kurkalang S, Banerjee A, Chatterjee P, Chanda A, Chatterjee A, Panda D, Mukherjee AK.  2016.  Mechanism of apoptosis induction in human breast cancer MCF-7 cell by Ruviprase, a small peptide from Daboia russelii russelii venom.[Mass Spectrometry]. Chem Biol Interact. 258:297-304.
Ramakrishnan P, Nair S, Rangiah K.  2016.  A method for comparative metabolomics in urine using high resolution mass spectrometry.. J Chromatogr A. 1443:83-92.
Mukherjee AK, Kalita B, Mackessy SP.  2016.  A proteomic analysis of Pakistan Daboia russelii russelii venom and assessment of potency of Indian polyvalent and monovalent antivenom.[Mass Spectrometry]. J Proteomics. 144:73-86.
Bordoloi NK, Bhagowati P, Chaudhuri MK, Mukherjee AK.  2016.  Proteomics and Metabolomics Analyses to Elucidate the Desulfurization Pathway of Chelatococcus sp.[Mass Spectrometry]. PLoS One. 11(4):e0153547.
Mukherjee AK, Dutta S, Kalita B, Jha DK, Deb P, Mackessy SP.  2016.  Structural and functional characterization of complex formation between two Kunitz-type serine protease inhibitors from Russell's Viper venom.[Mass Spectrometry]. Biochimie. 128-129:138-47.
Banerjee S, Coussens NP, Gallat F-X, Sathyanarayanan N, Srikanth J, Yagi KJ, Gray JSS, Tobe SS, Stay B, Chavas LMG et al..  2016.  Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata. [Mass spectrometry - Glycomics]. IUCrJ. 3(Pt 4):282-93.
Kalita B, Patra A, Mukherjee AK.  2016.  Unraveling the Proteome Composition and Immuno-profiling of Western India Russell's Viper Venom for In-Depth Understanding of Its Pharmacological Properties, Clinical Manifestations, and Effective Antivenom Treatment.[Mass Spectrometry]. J Proteome Res.
2015
Thakur R, Chattopadhyay P, Mukherjee AK.  2015.  Biochemical and pharmacological characterization of a toxic fraction and its cytotoxin-like component isolated from Russell's viper (Daboia russelii russelii) venom. (Mass Spectrometry). Comp Biochem Physiol C Toxicol Pharmacol. 168:55-65.
Kuravadi NA, Yenagi V, Rangiah K, Mahesh HB, Rajamani A, Shirke MD, Russiachand H, Loganathan RMalarini, Lingu CShankara, Siddappa S et al..  2015.  Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree. [Mass spectrometry - Metabolomics]. PeerJ. 3:e1066.
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.[Drosophila facility]. PLoS Genet. 11(1):e1004948.
Chakraborty M, Paul BK, Nayak T, Das A, Jana NR, Bhutani S.  2015.  The E3 ligase ube3a is required for learning in Drosophila melanogaster. [Drosophila facility]. Biochem Biophys Res Commun. 462(1):71-7.
Thakur R, Chattopadhyay P, Ghosh SS, Mukherjee AK.  2015.  Elucidation of procoagulant mechanism and pathophysiological significance of a new prothrombin activating metalloprotease purified from Daboia russelii russelii venom. (Mass Spectrometry). Toxicon. 100:1-12.

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