Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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2018
Lal A, Krishna S, Seshasayee ASai Narain.  2018.  Regulation of Global Transcription in by Rsd and 6S RNA. [Next Gen Genomics Facility (INT)]. G3 (Bethesda).
Bharatham N, Slavish PJ, Young BM, Shelat AA.  2018.  The role of ZA channel water-mediated interactions in the design of bromodomain-selective BET inhibitors.. J Mol Graph Model. 81:197-210.
Bharatham N, Slavish PJ, Young BM, Shelat AA.  2018.  The role of ZA channel water-mediated interactions in the design of bromodomain-selective BET inhibitors.. J Mol Graph Model. 81:197-210.
Haq SF, Shanbhag AP, Karthikeyan S, Hassan I, Thanukrishnan K, Ashok A, Sukumaran S, Ramaswamy S, Bharatham N, Datta S et al..  2018.  A strategy to identify a ketoreductase that preferentially synthesizes pharmaceutically relevant (S)-alcohols using whole-cell biotransformation [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. Microb Cell Fact. 17(1):192.
Haq SF, Shanbhag AP, Karthikeyan S, Hassan I, Thanukrishnan K, Ashok A, Sukumaran S, Ramaswamy S, Bharatham N, Datta S et al..  2018.  A strategy to identify a ketoreductase that preferentially synthesizes pharmaceutically relevant (S)-alcohols using whole-cell biotransformation [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. Microb Cell Fact. 17(1):192.
Haq SF, Shanbhag AP, Karthikeyan S, Hassan I, Thanukrishnan K, Ashok A, Sukumaran S, Ramaswamy S, Bharatham N, Datta S et al..  2018.  A strategy to identify a ketoreductase that preferentially synthesizes pharmaceutically relevant (S)-alcohols using whole-cell biotransformation [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. Microb Cell Fact. 17(1):192.
2017
Khandelwal R, Sipani R, Rajan SGovinda, Kumar R, Joshi R.  2017.  Combinatorial action of Grainyhead, Extradenticle and Notch in regulating Hox mediated apoptosis in Drosophila larval CNS.. PLoS Genet. 13(10):e1007043.
Somashekar L, Selvaraju S, Parthipan S, Patil SK, Binsila BK, Venkataswamy MM, S Bhat K, Ravindra JP.  2017.  Comparative sperm protein profiling in bulls differing in fertility and identification of phosphatidylethanolamine-binding protein 4, a potential fertility marker [Mass Spectrometry - Proteomics]. Andrology. 5(5):1032-1051.
Somashekar L, Selvaraju S, Parthipan S, Patil SK, Binsila BK, Venkataswamy MM, S Bhat K, Ravindra JP.  2017.  Comparative sperm protein profiling in bulls differing in fertility and identification of phosphatidylethanolamine-binding protein 4, a potential fertility marker [Mass Spectrometry - Proteomics]. Andrology. 5(5):1032-1051.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2017.  Data on identification of conserved and novel miRNAs in Elettaria cardamomum [Next Gen Genomics Facility]. Data Brief. 14:789-792.
Ghatak A, Bharatham N, Shanbhag AP, Datta S, Venkatraman J.  2017.  Delineating Substrate Diversity of Disparate Short-Chain Dehydrogenase Reductase from Debaryomyces hansenii [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. PLoS One. 12(1):e0170202.
Narayanannair A, Nadiya F, Thomas J, Sabu K.  2017.  Discovery of MicroRNAs in Cardamom ( Elettaria cardamomum Maton) under Drought Stress. Dataset Papers in Science. 2017:1-4.
Mangrauthia SK, Bhogireddy S, Agarwal S, Prasanth VV, Voleti SR, Neelamraju S, Subrahmanyam D.  2017.  Genome-wide changes in microRNA expression during short and prolonged heat stress and recovery in contrasting rice cultivars [Next Gen Genomics Facility]. J Exp Bot. 68(9):2399-2412.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Velmurugan G, Ramprasath T, Swaminathan K, Mithieux G, Rajendhran J, Dhivakar M, Parthasarathy A, Babu DDVenkates, Thumburaj LJohn, Freddy AJ et al..  2017.  Gut microbial degradation of organophosphate insecticides-induces glucose intolerance via gluconeogenesis. [Next Generation Genomics facility]. Genome Biol. 18(1):8.
Ashwini S, Bobby Z, Sridhar MG, Cleetus CC.  2017.  Insulin Plant (Costus pictus) Extract Restores Thyroid Hormone Levels in Experimental Hypothyroidism [Mass Spectrometry - Metabolomics Facility].. Pharmacognosy Res. 9(1):51-59.
Hebbar S, Khandelwal A, Jayashree R, Hindle SJ, Chiang YNing, Yew JY, Sweeney ST, Schwudke D.  2017.  Lipid metabolic perturbation is an early-onset phenotype in adultmutants: amodel for lysosomal storage disorders. [Mass Spectrometry - Lipidomics]. Mol Biol Cell. 28(26):3728-3740.
Hebbar S, Khandelwal A, Jayashree R, Hindle SJ, Chiang YNing, Yew JY, Sweeney ST, Schwudke D.  2017.  Lipid metabolic perturbation is an early-onset phenotype in adultmutants: amodel for lysosomal storage disorders. [Mass Spectrometry - Lipidomics]. Mol Biol Cell. 28(26):3728-3740.
Srikanth J, Agalyadevi R, Babu P.  2017.  Targeted, Site-specific quantitation of N- and O-glycopeptides using (18)O-labeling and product ion based mass spectrometry.. Glycoconj J. 34(1):95-105.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2017.  Transcriptome profiling of Elettaria cardamomum (L.) Maton (small cardamom).. Genom Data. 11:102-103.
Sathyanarayana N, Pittala RKumar, Tripathi PKumar, Chopra R, Singh HRussiachan, Belamkar V, Bhardwaj PKumar, Doyle JJ, Egan AN.  2017.  Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers [Next Gen Genomics Facility]. BMC Genomics. 18(1):409.
Sathyanarayana N, Pittala RKumar, Tripathi PKumar, Chopra R, Singh HRussiachan, Belamkar V, Bhardwaj PKumar, Doyle JJ, Egan AN.  2017.  Transcriptomic resources for the medicinal legume Mucuna pruriens: de novo transcriptome assembly, annotation, identification and validation of EST-SSR markers [Next Gen Genomics Facility]. BMC Genomics. 18(1):409.
2016
Ambardar S, Singh HRussiachan, Gowda M, Vakhlu J.  2016.  Comparative Metagenomics Reveal Phylum Level Temporal and Spatial Changes in Mycobiome of Belowground Parts of Crocus sativus [Next Gen Genomics Facility]. PLoS One. 11(9):e0163300.
Rai A, Pathak D, Thakur S, Singh S, Dubey AKumar, Mallik R.  2016.  Dynein Clusters into Lipid Microdomains on Phagosomes to Drive Rapid Transport toward Lysosomes.. Cell. 164(4):722-34.
Banerjee S, Coussens NP, Gallat F-X, Sathyanarayanan N, Srikanth J, Yagi KJ, Gray JSS, Tobe SS, Stay B, Chavas LMG et al..  2016.  Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata. [Mass spectrometry - Glycomics]. IUCrJ. 3(Pt 4):282-93.

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