Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title Type [ Year(Desc)]
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2011
Guruharsha KG, Rual J-F, Zhai B, Mintseris J, Vaidya P, Vaidya N, Beekman C, Wong C, Rhee DY, Cenaj O et al..  2011.  A protein complex network of Drosophila melanogaster. [Drosophila facility]. Cell. 147(3):690-703.
2015
Kuravadi NA, Yenagi V, Rangiah K, Mahesh HB, Rajamani A, Shirke MD, Russiachand H, Loganathan RMalarini, Lingu CShankara, Siddappa S et al..  2015.  Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree. [Mass spectrometry - Metabolomics]. PeerJ. 3:e1066.
Chakrabarti P, Kolay S, Yadav S, Kumari K, Nair A, Trivedi D, Raghu P.  2015.  A dPIP5K dependent pool of phosphatidylinositol 4,5 bisphosphate (PIP2) is required for G-protein coupled signal transduction in Drosophila photoreceptors.[Drosophila facility]. PLoS Genet. 11(1):e1004948.
Yadav S, Garner K, Georgiev P, Li M, Gomez-Espinosa E, Panda A, Mathre S, Okkenhaug H, Cockcroft S, Raghu P.  2015.  RDGBα, a PtdIns-PtdOH transfer protein, regulates G-protein-coupled PtdIns(4,5)P2 signalling during Drosophila phototransduction.[Drosophila Facility]. J Cell Sci. 128(17):3330-44.
2016
Banerjee S, Coussens NP, Gallat F-X, Sathyanarayanan N, Srikanth J, Yagi KJ, Gray JSS, Tobe SS, Stay B, Chavas LMG et al..  2016.  Structure of a heterogeneous, glycosylated, lipid-bound, in vivo-grown protein crystal at atomic resolution from the viviparous cockroach Diploptera punctata. [Mass spectrometry - Glycomics]. IUCrJ. 3(Pt 4):282-93.
2017
Boya R, Yadavalli ADevi, Nikhat S, Kurukuti S, Palakodeti D, Pongubala JMR.  2017.  Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment.. Nucleic Acids Res.
Hebbar S, Khandelwal A, Jayashree R, Hindle SJ, Chiang YNing, Yew JY, Sweeney ST, Schwudke D.  2017.  Lipid metabolic perturbation is an early-onset phenotype in adultmutants: amodel for lysosomal storage disorders. [Mass Spectrometry - Lipidomics]. Mol Biol Cell. 28(26):3728-3740.
Vikram A, Lewarchik CM, Yoon J-Y, Naqvi A, Kumar S, Morgan GM, Jacobs JS, Li Q, Kim Y-R, Kassan M et al..  2017.  Sirtuin 1 regulates cardiac electrical activity by deacetylating the cardiac sodium channel.. Nat Med.
2018
Shadrick WR, Slavish PJ, Chai SC, Waddell B, Connelly M, Low JA, Tallant C, Young BM, Bharatham N, Knapp S et al..  2018.  Exploiting a water network to achieve enthalpy-driven, bromodomain-selective BET inhibitors. Bioorganic & Medicinal Chemistry. 26:25-36.
Yang G, Humphrey SJ, Murashige DS, Francis D, Wang Q-P, Cooke KC, Neely G, James DE.  2018.  RagC phosphorylation autoregulates mTOR complex 1. [Drosophila Facility]. EMBO J.
Bharatham N, Slavish PJ, Young BM, Shelat AA.  2018.  The role of ZA channel water-mediated interactions in the design of bromodomain-selective BET inhibitors.. J Mol Graph Model. 81:197-210.
2019
Yoganandham SThodhal, Ravindranath* RRajasree S, Sathyamoorthy G, Renuka RRajan, Lakshminarayanan A.  2019.  Hematite Nanoparticles: synthesis, characterization and aquatic ecotoxicity effects [Central Imaging and Flow Cytometry Facility]. Research Journal of Biotechnology. 14(6)
Patel P, Yadav K, Srivastava AKumar, Suprasanna P, Ganapathi TRamabhatta.  2019.  Overexpression of native Musa-miR397 enhances plant biomass without compromising abiotic stress tolerance in banana [Mass Spectrometry - Metabolomics Facility].. Sci Rep. 9(1):16434.
Valmiki RRamanna, Venkatesalu S, Chacko AGeorge, Prabhu K, Thomas MMary, Mathew V, Yoganathan S, Muthusamy K, Chacko G, Vanjare HArvind et al..  2019.  Phosphoproteomic analysis reveals Akt isoform-specific regulation of cytoskeleton proteins in human temporal lobe epilepsy with hippocampal sclerosis [Mass Spectrometry - Proteomics]. Neurochem Int. :104654.
Sn S, Pandurangi J, Murumalla R, Dj V, Garimella L, Acharya A, Rai S, Paul A, Yarreiphang H, Pillai MS et al..  2019.  Small molecule modulator of aggrephagy regulates neuroinflammation to curb pathogenesis of neurodegeneration [Discovery to Innovation Accelerator (INT)].. EBioMedicine.
2020
Yadav P, Srivastva S, Patil T, Raghuvanshi R, Srivastava AK, Suprasanna P.  2020.  Tracking the time-dependent and tissue-specific processes of arsenic accumulation and stress responses in rice (Oryza sativa L.) [Mass Spectrometry - Metabolomics Facility]. Journal of Hazardous Materials. :124307.
2021
Yadav N., Chauhan M.K., Chauhan V.S..  2021.  Conformationally constrained dipeptide-based hydrogel as a platform for 3D cell growth and tissue engineering applications [Dr. Nitin Yadav, a BIG Funding Grantee/Start-up]. Applied Nanoscience . 34
Bharatham N, Bhowmik P, Aoki M, Okada U, Sharma S, Yamashita E, Shanbhag AP, Rajagopal S, Thomas T, Sarma M et al..  2021.  Structure and function relationship of OqxB efflux pump from Klebsiella pneumoniae [Bugworks, a C-CAMP startup]. Nature communications. 12:1–12.
2022
Yadav N, Kumar U, Roopmani P, Krishnan UMaheswari, Sethuraman S, Chauhan MK, Chauhan VS.  2022.  Ultrashort Peptide-Based Hydrogel for the Healing of Critical Bone Defects in Rabbits [C-CAMP BIG Grantee/Startup]. ACS Appl Mater Interfaces.
2023
Yadav N, Kumar U, Chauhan VSingh.  2023.  Conformationally restricted, dipeptide-based, self-assembled nanoparticles for efficient vancomycin delivery. [C-CAMP BIG Grantee/Startup]. Nanomedicine (Lond).
Pasari N, Gupta M, Sinha T, Ogunmolu FEmmanuel, Yazdani SShams.  2023.  Systematic identification of CAZymes and transcription factors in the hypercellulolytic fungus Penicillium funiculosum NCIM1228 involved in lignocellulosic biomass degradation [Next Gen Genomics Facility]. Biotechnol Biofuels Bioprod. 16(1):150.
2024
Yadav N, Chauhan VS.  2024.  Advancements in peptide-based antimicrobials: A possible option for emerging drug-resistant infections [C-CAMP BIG Grantee/Startup]. Adv Colloid Interface Sci. 333:103282.