Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Journal Article

Nayak SRanjan, Joseph D, Höfner G, Dakua A, Athreya A, Wanner KT, Kanner BI, Penmatsa A. 2023. Cryo-EM structure of GABA transporter 1 reveals substrate recognition and transport mechanism [National Cryo-Electron Microscopy Facility]. Nat Struct Mol Biol.

Kumar R, Mohammad A, Saini RV, Chahal A, Wong C-M, Sharma D, Kaur S, Kumar V, Winterbourn CC, Saini AK. 2019. Deciphering the in vivo redox behavior of human peroxiredoxins I and II by expressing in budding yeast [Mass Spectrometry - Proteomics].. Free Radic Biol Med. 145:321-329.

Kumar R, Mohammad A, Saini RV, Chahal A, Wong C-M, Sharma D, Kaur S, Kumar V, Winterbourn CC, Saini AK. 2019. Deciphering the in vivo redox behavior of human peroxiredoxins I and II by expressing in budding yeast [Mass Spectrometry - Proteomics].. Free Radic Biol Med. 145:321-329.

Behring JB, Kumar V, Whelan SA, Chauhan P, Siwik DA, Costello CE, Colucci WS, Cohen RA, McComb ME, Bachschmid MM. 2014. Does reversible cysteine oxidation link the Western diet to cardiac dysfunction? FASEB J. 28(5):1975-87.

Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M et al.. 2019. Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway [Discovery to Innovation Accelerator]. Nat Commun. 10(1):89.

Shadrick WR, Slavish PJ, Chai SC, Waddell B, Connelly M, Low JA, Tallant C, Young BM, Bharatham N, Knapp S et al.. 2018. Exploiting a water network to achieve enthalpy-driven, bromodomain-selective BET inhibitors. Bioorganic & Medicinal Chemistry. 26:25-36.

Sen S, Cao D, Choudhary R, Biagini S, Wang JW, Reichert H, VijayRaghavan K. 2014. Genetic transformation of structural and functional circuitry rewires the Drosophila brain. [Drosophila Facility]. Elife. 3

Lomate PR, Dewangan V, Mahajan N, Kumar Y, Kulkarni A, Wang L, Saxsena S, Gupta VS, Giri AP. 2018. Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in [Next Gen Genomics Facility]. Mol Cell Proteomics.

Ganaie MY, Qureshi S, Kashoo Z, Wani SA, Hussain MI, Kumar R, Maqbool R, Sikander P, Banday MS, Malla WA et al.. 2018. Isolation and characterization of two lytic bacteriophages against Staphylococcus aureus from India: newer therapeutic agents against Bovine mastitis. [Electron Microscopy Facility]. Vet Res Commun.

Baranyai T, Herczeg K, Onódi Z, Voszka I, Módos K, Marton N, Nagy G, Mäger I, Wood MJ, Andaloussi SEl et al.. 2015. Isolation of Exosomes from Blood Plasma: Qualitative and Quantitative Comparison of Ultracentrifugation and Size Exclusion Chromatography Methods. (Mass spectrometry - Proteomics). PLoS One. 10(12):e0145686.

Walvekar AS, Srinivasan R, Gupta R, Laxman S. 2018. Methionine coordinates a hierarchically organized anabolic program enabling proliferation. [Mass Spectrometry - Lipidomics & Metabolomics and Next Gen Sequencing Facilities (INT)]. Mol Biol Cell. :mbcE18080515.

Guruharsha KG, Rual J-F, Zhai B, Mintseris J, Vaidya P, Vaidya N, Beekman C, Wong C, Rhee DY, Cenaj O et al.. 2011. A protein complex network of Drosophila melanogaster. [Drosophila facility]. Cell. 147(3):690-703.

Guruharsha KG, Rual J-F, Zhai B, Mintseris J, Vaidya P, Vaidya N, Beekman C, Wong C, Rhee DY, Cenaj O et al.. 2011. A protein complex network of Drosophila melanogaster. [Drosophila facility]. Cell. 147(3):690-703.

Yang G, Humphrey SJ, Murashige DS, Francis D, Wang Q-P, Cooke KC, Neely G, James DE. 2018. RagC phosphorylation autoregulates mTOR complex 1. [Drosophila Facility]. EMBO J.

Kumar V, Kleffmann T, Hampton MB, Cannell MB, Winterbourn CC. 2013. Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry.. Free Radic Biol Med. 58:109-17.

Toda H, Williams JA, Gulledge M, Sehgal A. 2019. A sleep-inducing gene, nemuri, links sleep and immune function in Drosophila [Transgenic Fly Facility]. Science. 363(6426):509-515.

Stelfox M, Burian A, Shanker K, Rees AF, Jean C, Willson MS, Manik NAhmed, Sweet M. 2020. Tracing the origin of olive ridley turtles entangled in ghost nets in the Maldives: A phylogeographic assessment of populations at risk [Next Gen Genomics Facility]. Biological Conservation. 245:108499.

Walvekar A, Rashida Z, Maddali H, Laxman S. 2018. A versatile LC-MS/MS approach for comprehensive, quantitative analysis of central metabolic pathways. [Mass Spectrometry - Lipidomics & Metabolomics (INT)]. Wellcome Open Res. 3:122.

Vyas N, Walvekar A, Tate D, Lakshmanan V, Bansal D, Cicero ALo, Raposo G, Palakodeti D, Dhawan J. 2014. Vertebrate Hedgehog is secreted on two types of extracellular vesicles with different signaling properties. (Mass spectrometry - Proteomics). Sci Rep. 4:7357.

Report

Bairy S, Gopalan LNarayanan, Setty TGangi, Srinivasachari S, Manjunath L, Kumar JPrakash, Guntupalli SR, Bose S, Nayak V, Ghosh S et al.. 2018. Automation aided optimization of cloning, expression and purification of enzymes of the bacterial sialic acid catabolic and sialylation pathways enzymes for structural studies. [Protein Technology (INT)].